Jobs · Engineering · New York

Member of the Technical Staff, Generative

Output Biosciences · Buffalo-Niagara Falls Area · 1 mo ago
EngineeringFull-time

About the role

Output is revolutionizing drug treatments by developing generative models that understand biology at the molecular level. Led by a team of experienced researchers and biotech veterans, this role involves designing and developing architectures for molecular data, from small molecules to peptides and mini proteins. The ideal candidate will be responsible for training models on distributed GPU clusters, evaluating results, and integrating biological reasoning into the generative pipeline.

Responsibilities

  • Design and build generative architectures for molecular data across multiple modalities
  • Develop training approaches that learn from diverse biological signals
  • Build methods for controllable, targeted generation of novel molecules
  • Integrate biological reasoning from the foundation model into the generative pipeline
  • Own the full research-to-training pipeline, including experiment design, distributed training, hyperparameter optimization, and iteration
  • Design evaluation frameworks to assess the biological significance, structural validity, and novelty of generated molecules

Requirements

  • PhD in computer science, machine learning, physics, mathematics, or a related field with 2+ years of post-doctoral or industry research experience
  • Bachelor's or Master's degree with 5+ years of hands-on research and engineering experience in generative modeling
  • Strong publication record in generative methods at top-tier venues
  • Extensive hands-on experience designing, building, and training deep generative models
  • Proficiency in Python and PyTorch, and experience with distributed multi-GPU infrastructure
  • Rigorous experimentalist with a track record of designing and evaluating models effectively
  • Production-quality code with good testing and maintainability practices

Qualifications

  • Experience applying generative models to molecular, chemical, or biological data
  • Background in chemistry, biology, computational biology, biophysics, or a related natural science
  • Experience with multi-modal learning or cross-modality translation
  • Experience with conditional or controllable generation methods
  • Contributions to open-source machine learning projects

Skills

  • Generative modeling
  • Deep learning
  • Machine learning
  • Python programming
  • PyTorch framework
  • Distributed computing
  • Biological data analysis

Benefits

  • Healthcare benefits including medical, dental, and vision coverage
  • Competitive salary and equity in a growing, well-funded startup
  • Open and transparent company culture
  • Regular feedback and support from leadership
  • Ownership of day-to-day management

Pay

Competitive salary and equity package

Schedule

Full-time position

Company Overview

Output is a biotechnology company operating in stealth mode. Backed by top-tier venture capital firms including Y Combinator, Output is led by a team of repeat founders and biotech veterans with multiple exits in AI x Bio. The company focuses on developing generative models that understand biology at the molecular level, aiming to generate novel drug treatments that are currently unattainable through traditional approaches.

Our Values

  • Heart: Foster a culture of ownership and pride in contributions.
  • Excellence: Commit to excellence and continuous improvement.
  • Practicality: Embrace practicality and results-oriented thinking.
  • Honesty: Value honesty and direct communication.
  • Fun: Create a workplace that is enjoyable, engaging, rewarding, and fulfilling.

What We Offer

  • Healthy feedback-focused environment with regular constructive feedback and support
  • Ownership of day-to-day management
  • Competitive salary and equity in a growing, well-funded startup
  • Excellent medical, dental, and vision coverage

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