Software Engineer III, Cloud Services - Brain Health

About the role

The Allen Institute is launching a new accelerator on human brain health and disease. This initiative aims to dramatically accelerate our understanding of human brain structure and function, identify the molecular, cellular and circuit basis of disease progression, and pioneer new therapeutic strategies targeting vulnerable and affected cell types. Our mission focuses on taking a human-centric approach to understanding and treating disease, combining a large-scale open science discovery approach across multiple diseases, AI-based disease modeling, and translational programs in specific diseases to move from discovery to clinical application.

Responsibilities

• Design and oversee implementation of secure, scalable, and compliant cloud-based systems for scientific data processing
• Ensure adherence to regulatory and security standards (e.g., NIST SP 800-171) where applicable
• Guide infrastructure optimization efforts, including performance tuning and cost management
• Represent the Allen Institute in technical discussions with external vendors (e.g., cloud providers) and scientific partners
• Collaborate effectively with engineers and architects from cloud providers and other vendors and partners
• Build and maintain strong relationships with internal stakeholders, including research teams, Central IT, and the Office of the CTO
• Translate complex technical concepts into clear, actionable insights for diverse audiences
• Collaborate with science teams to define requirements, scope, and priorities
• Identify risks, dependencies, and trade-offs, and proactively drive mitigation strategies
• Oversee production readiness, monitoring, and incident response processes
• Ensure reliability and maintainability of deployed systems
• Foster effective communication across cross-functional and cross-institutional teams

Requirements

• Bachelor’s degree in computer science, information technology, or equivalent experience
• Minimum three years of experience in architecting and implementing complex cloud solutions
• Minimum two years of experience designing or operating in regulated environments (e.g., working with Controlled Access Data)
• Proficiency with project management tools (e.g. Jira)
• Proficiency in at least one IaC tool (e.g. Terraform, CloudFormation)
• Proficiency with one or more programming or scripting languages (e.g. Python, PowerShell, Bash)
• Proficiency with Git for source code management
• Deep understanding of cloud platforms (e.g., AWS, Google Cloud, Azure) and distributed systems

Qualifications

• Relevant certifications (e.g. AWS Certified Solutions Architect)
• Demonstrated experience leading complex, cross-functional technical initiatives
• Strong communication and collaboration skills, with the ability to work effectively in cross-functional teams
• Experience with life sciences, healthcare, or scientific research environments
• Demonstrated experience engaging with vendors and managing technical partnerships

Skills

• Excellent problem-solving and analytical skills
• Ability to work independently and as part of a team
• Strong organizational and time management skills
• Ability to communicate technical concepts to non-technical stakeholders

Benefits

• Annualized Salary Range: $146,600 - $183,250
• Reasonable accommodations for qualified individuals with disabilities
• Relocation assistance offered
• Work visa sponsorship offered
• Medical, dental, vision, and basic life insurance
• 401(k) plan
• Paid time off as outlined in the Allen Institute’s Benefits Guide

Pay

Final salary depends on the required education for the role, experience, level of skills relevant to the role, and work location, where applicable.

Schedule

This role is currently able to work both remotely and onsite in a hybrid work environment. We are a Washington State employer, and the primary work location for all Allen Institute employees is 615 Westlake Ave N.; any remote work must be performed in Washington State.

Travel

Occasional travel to partner sites required

Occasional attendance and participation in national and international conferences required