Senior Software Engineer, Ontology & Reasoning Systems (819)

At Protegrity, we lead innovation by using AI and quantum-resistant cryptography to transform data protection across cloud-native, hybrid, on-premises, and open-source environments. We leverage advanced cryptographic methods such as tokenization, format-preserving encryption, and quantum-resilient techniques to protect sensitive data. As a global leader in data security, our mission is to ensure that data isn’t just valuable but also usable, trusted, and safe.

About the role

Protegrity is seeking a Senior Software Engineer to design and build the ontology and reasoning layer that connects structured sources, semi-structured metadata, and unstructured documents into a model supporting deterministic machine reasoning. You will formalize complex domains into entities, relationships, constraints, and rules that allow the system to derive conclusions from underlying facts, with a focus on explainability and traceability.

LLMs play an important role at the ingestion boundary, supporting extraction, normalization, and categorization of information from unstructured or ambiguous inputs. The reasoning layer itself must remain deterministic, auditable, and explainable, with appropriate checks on model-generated outputs before they are used as trusted facts. You will collaborate with product and research teams to define formal models, improve reasoning quality, and build systems that support accurate, reviewable outputs.

Responsibilities

• Own the ontology and rule layer that unifies structured, semi-structured, and unstructured enterprise data into a single reasoning model.
• Model entities, relationships, events, and constraints across heterogeneous sources, and develop rules that derive conclusions from combinations of facts.
• Use LLMs at the ingestion boundary for extraction, normalization, and categorization, with appropriate validation of model-generated outputs.
• Make system findings traceable by connecting each conclusion to the source facts and rules that produced it.
• Build retrieval capabilities, including vector search, keyword search, and graph traversal, to support reasoning workflows.
• Improve quality through entity resolution, constraint modeling, and structured handling of conflicting or overlapping sources.
• Ship production services and research prototypes with a focus on correctness, reliability, and maintainability.

Requirements

• 5+ years of experience building backend systems in a modern language such as Python, Go, Java, Scala, Rust, or similar, or equivalent practical experience.
• A strong formal and mathematical foundation, including discrete mathematics, logic, and graph theory.
• The ability to reason about soundness, completeness, and tractability, and to express complex domains as formal rules and constraints.
• Hands-on experience with declarative, logic-based, or rule-based reasoning systems such as Datalog, Answer Set Programming, constraint logic programming, Prolog, production rule engines, SMT solvers, or similar.
• Practical experience building LLM-powered systems, including structured extraction, RAG, or classification pipelines, with sound judgment about where model outputs require validation.
• Deep experience with knowledge graphs and graph data, including RDF, SPARQL, property graphs, or graph databases such as Neo4j.
• Experience designing systems whose outputs trace back to their inputs, including provenance, derivation chains, or evidence trails.
• Strong debugging, testing, and validation practices, with attention to correctness.

Nice to have

• Experience with constraint satisfaction or deductive reasoning, including CSP, unification, fixpoint or closure computation, or constraint propagation.
• Experience with formal ontology and semantics, including OWL, SHACL, description logics, or reasoners.
• Experience with LLM evaluation, entity resolution, citation validation, or hallucination reduction.
• Experience with symbolic computation, theorem proving, model checking, or formal verification.

Benefits

• Competitive salary and comprehensive benefits.
• Generous vacation and holiday time off.
• Access to ongoing learning and development.

Pay

Compensation Range: $237,600 - $266,700