Bioinformatics/Data Scientist

Overview

The Bioinformatics/Data Scientist will conduct comprehensive analyses of multi-omics data generated from organoid systems and corresponding normal tissues. This position is central to the SOM Center's research objectives, focusing on characterizing organoid fidelity, identifying biomarkers of successful differentiation, and developing computational frameworks for organoid quality assessment.

Responsibilities

• Analyze complex datasets including single-cell RNA sequencing, bulk RNA sequencing, proteomics, and metabolomics data from various organoid systems and their tissue counterparts.
• Develop and implement computational pipelines for data processing, quality control, and statistical analysis.
• Integrate SOM-generated data with publicly available datasets to benchmark organoid characteristics against normal tissue profiles.
• Collaborate closely with experimental teams to interpret results and guide protocol optimization, as well as contribute to manuscript preparation and presenting findings at scientific conferences.

Required Qualifications

• Candidates must hold a PhD in bioinformatics, computational biology, biostatistics, or a related quantitative field.
• Extensive experience with single-cell data analysis, including familiarity with tools such as Seurat, Scanpy, or similar platforms, is essential.
• Strong programming skills in R and Python are required, along with experience in statistical analysis and data visualization.
• Knowledge of proteomics and metabolomics data analysis workflows is necessary.

Preferred Qualifications

• Previous experience analyzing organoid datasets is strongly preferred.
• Experience with machine learning approaches for biological data, familiarity with pathway analysis tools, and knowledge of developmental biology principles will be considered valuable assets.
• Experience with high-performance computing environments and version control systems is desirable.

Benefits

• 100% Medical, Dental & Vision Coverage for Employees
• Paid Time Off and Paid Holidays
• 401K match up to 5%
• Employee Referral Bonus
• Flexible Spending Accounts:
• Healthcare (FSA)
• Parking Reimbursement Account (PRK)
• Dependent Care Assistance Program (DCAP)
• Transportation Reimbursement Account (TRN)

Disclaimer

The above description is meant to illustrate the general nature of work and level of effort being performed by individuals assigned to this position or job description. This is not restricted as a complete list of all skills, responsibilities, duties, and/or assignments required. Individuals may be required to perform duties outside of their position, job description or responsibilities as needed.

Accessibility

If you need an accommodation as part of the employment process please contact: careers@axleinfo.com

Schedule

This role has a market-competitive salary with an anticipated base compensation range listed below. Actual salaries will vary depending on a candidate’s experience, qualifications, skills, and location.