Associate Scientist – Next-Generation Sequencing (NGS)

SeqMatic is a Next Generation Sequencing (NGS) and omics services provider based in the San Francisco South Bay Area. The company was founded in 2012 by former Illumina R&D scientists who are experts in the NGS workflow and related bioinformatics. We specialize in Illumina NGS platforms, bulk DNA/RNA-seq, Single-cell RNA, as well as custom sequencing services with fast turnaround times. Our lab is CLIA / CAP certified. We recently expanded our capabilities beyond RUO to support clinical trials for our Clients, in addition to incorporating novel technologies such as Spatial Transcriptomics, Epigenetics, Proteomics and Histopathology. Role Overview We are looking for a detail-oriented and hands-on Scientist to support and expand our Next-Generation Sequencing (NGS) operations. This role will be instrumental in onboarding new services, developing and optimizing workflows, and supporting day-to-day NGS laboratory activities, particularly in library preparation. The ideal candidate is highly organized, technically strong in NGS methods, and excited to drive process improvements in a dynamic lab environment. Key Responsibilities Lead the onboarding of new NGS service offerings, including workflow design, validation, and implementationDevelop, optimize, and troubleshoot NGS library preparation protocols across multiple platforms and applicationsExecute daily NGS lab operations, ensuring consistency, accuracy, and high-quality outputsEvaluate and improve existing workflows to enhance efficiency, scalability, and turnaround timeCollaborate cross-functionally with bioinformatics, operations, and quality teams to ensure seamless service deliveryDocument SOPs, validation reports, and process updates in compliance with quality standardsTrain and mentor lab staff on new workflows and best practices Qualifications Required: Master’s or Doctorate degree in Molecular Biology, Genomics, Biotechnology, or related field5+ years of hands-on experience in an NGS laboratory environmentStrong expertise in NGS library preparation techniques (e.g., WGS, RNA-seq, targeted panels, etc.)Experience in workflow optimization, assay development, or process improvementFamiliarity with sequencing platforms (e.g., Illumina, PacBio, Oxford Nanopore)Strong attention to detail, analytical thinking, and troubleshooting skillsExcellent documentation and communication abilities Preferred Experience on-boarding new assays or services in a clinical or commercial lab settingKnowledge of quality systems (CLIA, CAP, GLP, or similar)Exposure to automation platforms for library preparationBasic understanding of NGS bioinformatic analysis workflows The Pay Range For This Role Is 90,000 - 100,000 USD per year(Fremont Blvd)